Package: tidysdm 0.0.0.9000
Russell Dinnage
tidysdm: Sprecies Distribution Modelling with Tidymodels
Provides functions and classes to help create Species Distribution Models (SDMs) within the {tidymodels} framework. Provides new {parsnip} models, new {recipes} steps, and {yardstick} metrics. This package provides access to the powerful {tidymodels} ecosystem for SDMs, especially the package {spatialsample} for spatially aware cross validation and model evaluation, as well as opening up all classification models implemented in {parsnip} for presence-only SDMs, using the pseudo-absence approach.
Authors:
tidysdm_0.0.0.9000.tar.gz
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tidysdm_0.0.0.9000.tgz(r-4.4-any)tidysdm_0.0.0.9000.tgz(r-4.3-any)
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tidysdm.pdf |tidysdm.html✨
tidysdm/json (API)
# Install 'tidysdm' in R: |
install.packages('tidysdm', repos = c('https://rdinnager.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/rdinnager/tidysdm/issues
Last updated 1 years agofrom:5b82b81199. Checks:OK: 1 WARNING: 6. Indexed: no.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 20 2024 |
R-4.5-win | WARNING | Nov 20 2024 |
R-4.5-linux | WARNING | Nov 20 2024 |
R-4.4-win | WARNING | Nov 20 2024 |
R-4.4-mac | WARNING | Nov 20 2024 |
R-4.3-win | WARNING | Nov 20 2024 |
R-4.3-mac | WARNING | Nov 20 2024 |
Exports::=.dataadd_env_varsas_labelas_namecreate_backgroundcreate_prediction_gridenquoenquosget_spatial_neighbourspo_spatial_buffer_vfold_cvsdm_datastep_add_env_varsstep_fill_spatial_lagsstep_initialize_spatial_lagsstep_sample_pseudo_absencesstep_thin_pseudo_absences
Dependencies:abindBHclassclassIntcliclockcodetoolscolorspacecpp11data.tableDBIdiagramdigestdplyre1071fansifarverfasterizefuturefuture.applygenericsggplot2globalsgluegowergtablehardhatipredisobandKernSmoothlabelinglatticelavalifecyclelistenvlubridatemagrittrMASSMatrixmgcvmunsellnabornlmennetnngeonumDerivparallellyparsnippillarpkgconfigprettyunitsprodlimprogressrproxypurrrR6rasterRColorBrewerRcppRcppArmadilloRcppEigenrecipesrlangrparts2scalessfshapespSQUAREMstarsstringistringrsurvivalterratibbletidyrtidyselecttimechangetimeDatetzdbunitsutf8vctrsviridisLitewithrwk
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Add environmental variables | add_env_vars |
Make background from points | create_background |
Generate a grid of values for making predictions | create_prediction_grid |
Get Spatial Neighbours | get_spatial_neighbours |
Spatial Cross Validation Designed for Presence-Only Data | po_spatial_buffer_vfold_cv |
Convert presence points and a background area into an 'sdm_data' object suitable for a 'tidysdm' workflow. | sdm_data |
Title | step_sample_pseudo_absences |